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Clc genomics workbench university of california

Clc genomics workbench university of california how to#
Clc genomics workbench university of california software#
Clc genomics workbench university of california free#

Establish an association between an outbreak and its source.Confirm the identity of pathogens, or starter cultures.Typing and whole genome based analysis of microbial isolates Stacked bar charts, area charts and zoomable sunburst diagrams to explore and compare the functional composition of metagenomic samples, or sample groups.Whole metagenome function analysis: Functional Profiling of Microbiomes Analyze and browse micro biome composition at different taxonomic levels and in the context of metadata.Supports common OTU Databases Greengenes, Silva, and UNITE.De novo or reference based OTU-clustering.From raw reads to interactive visualization in four steps.Analyze 16S rRNA or other amplicon data.Microbiome Analysis: Explore the taxonomic and functional composition of Microbial communities Histone ChIP-seq and bisulfite sequencingġ:00 pm-2:30 pm-Microbial Module Tools and Metagenomics Pipelines.Installation and setting up reference database(s)ġ1am-noon-DNA-seq, ChIP-seq, and Bisulfite-seq Pipelines.Overview of Application: Reqsequencing, RNA-seq, Small RNA, Epigenomics, De Novo Assembly, Microbial and Metagenomics.Location: Aresty Auditorium, Health Science Campusġ0-11 am-Introduction to the CLC Genomics Workbench Please follow the link below to register for the online training.ĬLC Genomics Workbench On-site Training at USCĭate and Time: 10 am to 4 pm, Friday September 30, 2016 To help USC researchers get started with this software, QIAGEN will provide an one-day on-site training.

Clc genomics workbench university of california free#

3, 2016, we will offer free access of the CLC Genomics Workbench Software, along with the Microbial Genomics Module and the Genome Finishing Module, to all USC users.

Clc genomics workbench university of california software#

Jacobs joined QIAGEN in 2018, and is the Director of Global Product Management, Genomic Analysis for QIAGEN Digital Insights, where he is directing the development of QIAGEN’s CLC software portfolio, a widely used commercial bioinformatics platform.This is the only on-site training on CLCbio Genomics Workbench in next 12 months, don’t miss it! In 2010, he joined MRIGlobal to build and lead a team focused on microbial forensics and pathogen genomics. Jacobs joined MedImmune where he developed novel technologies in cell line engineering that resulted in multiple patent applications. Jacobs received postdoctoral training at the NIH’s National Cancer Institute, where his research focused on epigenetic control of gene expression in human oncology model systems. in molecular genetics and cell biology from the University of Maryland. in plant biology from the University of Arizona and later his Ph.D. Jonathan Jacobs, Ph.D., has 20 years of experience in bioinformatics, molecular genetics and microbial genomics.

Clc genomics workbench university of california how to#

Advanced features of these solutions, including the use of third-party external applications, the REST API and our Software Developers Kit (SDK)ĭon’t miss this opportunity to learn how to scale your bioinformatics!.

QIAGEN CLC Assembly Cell, a set of command-line versions of QIAGEN CLC’s most advanced core algorithms.

Using QIAGEN CLC Genomic Cloud Engine for both single workbench and in a hybrid-cloud.

QIAGEN CLC Genomics Server for data analysis with QIAGEN CLC Genomics Workbench or from the command line.

Case studies demonstrating the utility of QIAGEN CLC Genomics Server and QIAGEN CLC Genomics Cloud Engine, including examples of our Biomedical Genomics Analysis plugin for RNA-seq gene expression analysis, analysis of QIAseq panels for somatic variant calling, and analysis of microbiome and antimicrobial resistance data using QIAGEN CLC Microbial Genomics Module.

Overview of QIAGEN CLC enterprise solutions.

These topics will be discussed in this webinar: QIAGEN CLC Genomics Server and QIAGEN CLC Genomics Cloud Engine are two interoperable solutions that enhance your ability to scale your bioinformatics workflows.īy attending this webinar, you will learn how to use QIAGEN Digital Insight’s enterprise solutions to extend the powerful QIAGEN CLC Genomics Workbench platform to tackle even the greatest bioinformatics challenges. Bioinformatics analysis of genomics data often requires the ability to reliably scale computational workflows, while maintaining reproducibility and availability of the results.